Cancer miRNA Regulatory Network

This page contains all miRNA mediated regulation and functional enrichment for CA Colon Graudens cluster number 44. Information about colon cancer can be found on Wikipedia, and further information about the "CA Colon Graudens" dataset can be found in Graudens et al., 2006.

Weeder-miRvestigator	PITA	TargetScan
zzz999	zzz999	zzz999

GO ID	GO Term	Annotated Genes in Cluster
GO:0000084	S phase of mitotic cell cycle	41
GO:0000278	mitotic cell cycle	158
GO:0000375	RNA splicing, via transesterification reactions	56
GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	56
GO:0000398	nuclear mRNA splicing, via spliceosome	56
GO:0006139	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	875
GO:0006367	transcription initiation from RNA polymerase II promoter	24
GO:0006368	transcription elongation from RNA polymerase II promoter	23
GO:0006370	mRNA capping	13
GO:0006396	RNA processing	170
GO:0006397	mRNA processing	102
GO:0006915	apoptosis	324
GO:0006950	response to stress	522
GO:0006974	response to DNA damage stimulus	137
GO:0007049	cell cycle	281
GO:0008104	protein localization	252
GO:0008152	metabolic process	1646
GO:0008219	cell death	353
GO:0008380	RNA splicing	78
GO:0009057	macromolecule catabolic process	147
GO:0009452	RNA capping	13
GO:0009987	cellular process	2214
GO:0010467	gene expression	778
GO:0010758	regulation of macrophage chemotaxis	5
GO:0010759	positive regulation of macrophage chemotaxis	4
GO:0012501	programmed cell death	328
GO:0015031	protein transport	211
GO:0016032	viral reproduction	99
GO:0016070	RNA metabolic process	582
GO:0016071	mRNA metabolic process	133
GO:0016265	death	353
GO:0019538	protein metabolic process	657
GO:0022402	cell cycle process	213
GO:0022403	cell cycle phase	177
GO:0022613	ribonucleoprotein complex biogenesis	53
GO:0033036	macromolecule localization	301
GO:0033554	cellular response to stress	218
GO:0034660	ncRNA metabolic process	66
GO:0042981	regulation of apoptosis	258
GO:0043065	positive regulation of apoptosis	142
GO:0043067	regulation of programmed cell death	261
GO:0043068	positive regulation of programmed cell death	143
GO:0043170	macromolecule metabolic process	1272
GO:0044237	cellular metabolic process	1510
GO:0044238	primary metabolic process	1507
GO:0044260	cellular macromolecule metabolic process	1189
GO:0044265	cellular macromolecule catabolic process	120
GO:0044267	cellular protein metabolic process	594
GO:0045123	cellular extravasation	9
GO:0045184	establishment of protein localization	212
GO:0048518	positive regulation of biological process	564
GO:0048522	positive regulation of cellular process	520
GO:0051320	S phase	41
GO:0051325	interphase	92
GO:0051329	interphase of mitotic cell cycle	92
GO:0051726	regulation of cell cycle	154

miRNA	Method	GO ID	GO Term	Overlap	GO Annotated Genes	Cluster Size	miRNA Targets Genes	P-Value

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